CENTDIST is a novel web-application for identifying co-localized transcription factors around ChIP-seq peaks. Unlike traditional motif scanning program, CENTDIST does not require any user-specific parameters and the background. It automatically learns the best set of parameters for different motifs and ranks them based on the skewness of their distribution around ChIP-seq peaks.
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Nucleic Acids Res. 2011 Jul;39(Web Server issue):W391-9. doi: 10.1093/nar/gkr387. Epub 2011 May 20.
CENTDIST: discovery of co-associated factors by motif distribution.
Zhang Z1, Chang CW, Goh WL, Sung WK, Cheung E.