EBChangePoint 0.1.0 – Empirical Bayes Change-point Model

EBChangePoint 0.1.0

:: DESCRIPTION

EBChangePoint could efficiently pool information across genes to improve detection efficiency.

::DEVELOPER

EBChangePoint team

:: SCREENSHOTS

n/a

:: REQUIREMENTS

  • Linux
  • Perl

:: DOWNLOAD

 EBChangePoint

:: MORE INFORMATION

Citation:

An empirical Bayes change-point model for identifying 3′ and 5′ alternative splicing by next-generation RNA sequencing.
Zhang J, Wei Z.
Bioinformatics. 2016 Feb 11. pii: btw060.

Bayes – Modeling Incomplete Alignments in Phylogenetic Inference

Bayes

:: DESCRIPTION

Bayes is a statistical method for inferring phylogenetic trees from EST-based incomplete MSA data.

::DEVELOPER

Mayetri Gupta

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/ Windows/ MacOsX
  • R package

:: DOWNLOAD

 Bayes

:: MORE INFORMATION

Citation

Bioinformatics. 2009 Mar 1;25(5):592-8. doi: 10.1093/bioinformatics/btp015.
A hierarchical model for incomplete alignments in phylogenetic inference.
Cheng F, Hartmann S, Gupta M, Ibrahim JG, Vision TJ.