Spanner is a structural homology modeling program that threads a query amino-acid sequence onto a template protein structure. Spanner is unique in that it handles gaps by spanning the region of interest using fragments of known structures.
Systems Immunology Laboratory , Osaka University
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Immunome Res. 2011 Apr 1;7(1):1-8.
Bridging the gap between single-template and fragment based protein structure modeling using Spanner.
Lis M, Kim T, Sarmiento JJ, Kuroda D, Dinh HV, Kinjo AR, Amada K, Devadas S, Nakamura H, Standley DM.