Simmune is the name of a suite of software tools that guides the user through the multiple hierarchical scales of cellular behavior, facilitating the generation of comprehensive models. It was originally created to simulate immunological phenomena — hence its name, Simmune — but it is applicable to a very broad class of cell biological models.
Simmune consists of three components:
- Simmune modeler (short: ‘simmod’)
- simulator (short: ‘simmune’)
- signaling network browser.
Laboratory of Systems Biology , the National Institute of Allergy and Infectious Diseases, NIH
- Windows/ Linux / Mac OsX
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Bioinformatics. 2013 May 1;29(9):1229-30. doi: 10.1093/bioinformatics/btt134. Epub 2013 Mar 17.
The Simmune Modeler visual interface for creating signaling networks based on bi-molecular interactions.
Zhang F, Angermann BR, Meier-Schellersheim M.