mobility is a collection of Perl scripts to calculate gene-level similarity among annotated genomes. The scripts can be executed from the command line and the only dependencies are BioPerl and NCBI BLAST. Separately, we include a MATLAB script to calculate fluidity and its variance directly from matrices of shared and total gene counts.
:: MORE INFORMATION
Kislyuk et al.
Genomic fluidity: an integrative view of gene diversity within microbial populations
BMC Genomics 12: 32 (2011).