AxonTracker 1.0 – Track and Label Axon Structures

AxonTracker 1.0


AxonTracker is useful to semi-automatically track and label axon structures from the motor axon connectome datasets. It is a parameter-free software, and hence can be used over a broad range of datasets.The software is designed with ease of use in mind. The interface is simple and includes a 3D visualization of the dataset along with a real-time overlay of the tracking results. A 2D view of the dataset is also provided in order to interact with the software. Three orthogonal views are provided with a provision for back-tracking the results. Points can be added/deleted from the tracking results to provide guidance in case of an error.



TMHRI Center for Bioengineering and Informatics



  • Windows




The download and usage is free for academic and non-commercial purposes and if used in research and publications, it should be referenced.

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