zPicture / multi-zPicture
zPicture is a dynamic alignment and visualization tool that is based on blastz alignment program utilized by PipMaker. zPicture alignments can be automatically submitted to rVista 2.0 to identify conserved transcription factor binding sites.
multi-zPicture is a multi-sequence version of zPicture alignment and visualization tool.
Miller Lab at Penn State University Center for Comparative Genomics and Bioinformatics
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Ivan Ovcharenko, Gabriela G. Loots, Ross C. Hardison, Webb Miller, and Lisa Stubbs
zPicture: Dynamic Alignment and Visualization Tool for Analyzing Conservation Profiles
Genome Res. 2004. 14: 472-477