Dec 192013
 

YEASTRACT / YEASTRACT-DISCOVERER

:: DESCRIPTION

YEASTRACT is a curated repository of more than 206000 regulatory associations between transcription factors (TF) and target genes in Saccharomyces cerevisiae, based on more than 1300 bibliographic references.

YEASTRACT-DISCOVERER is a set of tools that can be used to identify complex motifs found to be over-represented in the promoter regions of co-regulated genes.

::DEVELOPER

YEASTRACT team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web Browser

:: DOWNLOAD

 NO

:: MORE INFORMATION

Citation

The YEASTRACT database: an upgraded information system for the analysis of gene and genomic transcription regulation in Saccharomyces cerevisiae.
Teixeira MC, Monteiro PT, Guerreiro JF, Gonçalves JP, Mira NP, Dos Santos SC, Cabrito TR, Palma M, Costa C, Francisco AP, Madeira SC, Oliveira AL, Freitas AT, Sá-Correia I.
Nucl. Acids Res. (2013)doi: 10.1093/nar/gkt1015

YEASTRACT: providing a programmatic access to curated transcriptional regulatory associations in Saccharomyces cerevisiae through a web services interface.
Abdulrehman D, Monteiro PT, Teixeira MC, Mira NP, Lourenço AB, dos Santos SC, Cabrito TR, Francisco AP, Madeira SC, Aires RS, Oliveira AL, Sá-Correia I, Freitas AT.
Nucleic Acids Res. 2011 Jan;39(Database issue):D136-40. doi: 10.1093/nar/gkq964.

YEASTRACT-DISCOVERER: new tools to improve the analysis of transcriptional regulatory associations in Saccharomyces cerevisiae.
Monteiro PT, Mendes ND, Teixeira MC, d’Orey S, Tenreiro S, Mira NP, Pais H, Francisco AP, Carvalho AM, Louren?o AB, Sá-Correia I, Oliveira AL, Freitas AT.
Nucleic Acids Res. 2008 Jan;36(Database issue):D132-6.

The YEASTRACT database: a tool for the analysis of transcription regulatory associations in Saccharomyces cerevisiae.
Teixeira MC, Monteiro P, Jain P, Tenreiro S, Fernandes AR, Mira NP, Alenquer M, Freitas AT, Oliveira AL, Sá-Correia I.
Nucleic Acids Res. 2006 Jan 1;34(Database issue):D446-51.

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