ViTraM (Visualization of Transcriptional Modules) is a flexible software platform for visualizing overlapping transcriptional modules in an intuitive way. By visualizing not only the genes and the experiments in which the genes are co-expressed, but also additional properties of the modules such as the regulators and regulatory motifs that are responsible for the observed co-expression, ViTraM can assist in the biological analysis and interpretation of the output of module detection tools.
- Linux / Windows / MacOsX
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H. Sun, K. Lemmens, T. Van den Buckle, K. Engelen, B. De Moor, K. Marchal.
“ViTraM: Visualization of Transcriptional Modules” (2009).