Oct 132013
 

VisCHAINER

:: DESCRIPTION

VisCHAINER is the interactive visualization component of the software system CoCoNUT. The current version of VisCHAINER plots the chains output by the program CHAINER . Each chain corresponds to a region of similarity among two or multiple genomes. Because these chains are multi-dimensional VisCHAINER displays projections in 2D plots.

::DEVELOPER

Asem Othman , Mohamed Ibrahim Abouelhoda

:: SCREENSHOTS

VisCHAINER

:: REQUIREMENTS

  • Linux / MacOsX / Windows
  • Java

:: DOWNLOAD

 VisCHAINER

:: MORE INFORMATION

Citation

Mohamed I. Abouelhoda, Stefan Kurtz, Enno Ohlebusch
CoCoNUT: an efficient system for the comparison and analysis of genomes
BMC Bioinformatics, 9:476, 2008.

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