VarEff estimates the effective sizes from actual to ancestral time with a coalescent approach. It works on steps of constant size to resolve the probabilities by an approximation of maximum likelihood from a Bayesian posterior distribution.
- Linux / Windows / MacOsX
- R pacakge
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Chevalet C & Nikolic N. 2010.
Distribution of coalescent times and distances between microsatellite alleles with changing effective population size.
Theoretical Population Biology. Volume 77, Issue 3: 152-163