May 212015
 

UNDO 1.10.0

:: DESCRIPTION

UNDO (UNsupervised DecOnvolution) is an R package that can be used to automatically detect cell-specific marker genes located on the scatter radii of mixed gene expressions, estimate cellular proportions in each sample, and deconvolute mixed expressions into cell-specific expression profiles.

::DEVELOPER

Computational Bioinformatics & Bio-imaging Laboratory (CBIL)

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows / Linux / MacOsX
  • R
  • Bioconductor

:: DOWNLOAD

 UNDO

:: MORE INFORMATION

Citation

UNDO: a Bioconductor R package for unsupervised deconvolution of mixed gene expressions in tumor samples.
Wang N, Gong T, Clarke R, Chen L, Shih IM, Zhang Z, Levine DA, Xuan J, Wang Y.
Bioinformatics. 2015 Jan 1;31(1):137-9. doi: 10.1093/bioinformatics/btu607.

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