tweeDEseq is an R package for analyzing RNAseq count data. It implements Poisson-Tweedie family of distributions to model count data distribution. This family includes Poisson and Negative Bionomial as particular cases. The testPT test is used to detect genes that are differentially expressed (DE).
- Linux / Windows/ MacOsX
:: MORE INFORMATION
BMC Bioinformatics. 2013 Aug 21;14:254. doi: 10.1186/1471-2105-14-254.
A flexible count data model to fit the wide diversity of expression profiles arising from extensively replicated RNA-seq experiments.
Esnaola M1, Puig P, Gonzalez D, Castelo R, Gonzalez JR.