TruHmm
:: DESCRIPTION
TruHmm is a reference based transcriptome assembler for prokaryotes, and is suitable for assembling transcripts for directional RNA-seq library.
::DEVELOPER
Dr. Su’s lab at the University of North Carolina at Charlotte.
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux /Windows
- Perl / C++
:: DOWNLOAD
:: MORE INFORMATION
Citation
BMC Genomics. 2013 Jul 30;14:520. doi: 10.1186/1471-2164-14-520.
Directional RNA-seq reveals highly complex condition-dependent transcriptomes in E. coli K12 through accurate full-length transcripts assembling.
Li S1, Dong X, Su Z.