TruHmm

:: DESCRIPTION

TruHmm is a reference based transcriptome assembler for prokaryotes, and is suitable for assembling transcripts for directional RNA-seq library.

::DEVELOPER

Dr. Su’s lab at the University of North Carolina at Charlotte.

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Linux /Windows
• Perl / C++

:: DOWNLOAD

 TruHmm

:: MORE INFORMATION

Citation

BMC Genomics. 2013 Jul 30;14:520. doi: 10.1186/1471-2164-14-520.
Directional RNA-seq reveals highly complex condition-dependent transcriptomes in E. coli K12 through accurate full-length transcripts assembling.
Li S1, Dong X, Su Z.