Dec 072012
 

TriCluster / MicroCluster

:: DESCRIPTION

Tricluster is the first tri-clustering algorithm for microarray expression clustering. It builds upon the new microCluster bi-clustering approach. Tricluster first mines all the bi-clusters across the gene-sample slices, and then it extends these into tri-clusters across time or space (depending on the third dimension). It can find both scaling and shifting patterns

MicroCluster is a deterministic biclustering algorithm that can mine arbitrarily positioned and overlapping clusters of gene expression data to find interesting patterns

::DEVELOPER

Mohammed J. Zaki

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • C++ Compiler

:: DOWNLOAD

 TriCluster / MicroCluster

:: MORE INFORMATION

Citation

Lizhuang Zhao and Mohammed J. Zaki,
TriCluster: An Effective Algorithm for Mining Coherent Clusters in 3D Microarray Data.
In ACM SIGMOD Conference on Management of Data. Jun 2005.

Lizhuang Zhao and Mohammed J. Zaki,
MicroCluster: An Efficient Deterministic Biclustering Algorithm for Microarray Data.
IEEE Intelligent Systems, 20(6):40-49. Nov/Dec 2005

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