TreeTest is a program for testing phylogenetic tree topologies in a frequentist framework.The software makes use of the baseml code (PAML), and implements tests of phylogenetic hypotheses (is the maximum likelihood tree the correct tree?) and significance tests.
- Linux / Windows
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Aris-Brosou, S. 2003.
Least and most powerful phylogenetic tests to elucidate the origin of the seed plants in presence of conflicting signals under misspecified models.
Syst. Biol. 52:781-793