The TIDAL (TIme-Dependent Activity Linker) generates a transcription factor regulatory network from time-series gene expression data. It will identify transcription factors that are active at each time-point in your data, and link these factors in a coherent cascade which can be visualized.
- Web Browser
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BMC Bioinformatics. 2013;14 Suppl 6:S1. doi: 10.1186/1471-2105-14-S6-S1. Epub 2013 Apr 17.
Reconstruction of regulatory networks through temporal enrichment profiling and its application to H1N1 influenza viral infection.
Zaslavsky E1, Nudelman G, Marquez S, Hershberg U, Hartmann BM, Thakar J, Sealfon SC, Kleinstein SH.