Jun 172014
 

TFBphylo 1.0

:: DESCRIPTION

TFBphylo is an R package implementing a phylogenetic tree based method to model the on/off rates of transcription factor binding (TFB) events, and uses the EM algorithm to estimate model parameters.

::DEVELOPER

Hongyu Zhao’s Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/ Linux/MacOsX
  • R package

:: DOWNLOAD

  TFBphylo

:: MORE INFORMATION

Citation

Stat Appl Genet Mol Biol. 2013 Feb 27:1-15. doi: 10.1515/sagmb-2012-0004. [Epub ahead of print]
Studying the evolution of transcription factor binding events using multi-species ChIP-Seq data.
Zheng W, Zhao H.

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