Dec 062012
 

text2genome 0.4

:: DESCRIPTION

text2genome is using a unique way to map scientific articles to genomic locations: From a full-text scientific article and it’s supplementary data files, all words that resemble DNA sequences are extracted and then mapped to public genome sequences. They can then be displayed on genome browser websites and used in data-mining applications.

::DEVELOPER

the Bergman labHaussler lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • Python

:: DOWNLOAD

 text2genome

:: MORE INFORMATION

Citation

Hauessler et al. (2011)
Annotating genes and genomes with DNA sequences extracted from biomedical articles
Bioinformatics (2011) 27 (7): 980-986.

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