TAPyR 1.3 beta4
TAPyR is a read mapper supporting data from multiple sequencing platforms, including Roche 454 GS FLX, Life Technologies Ion Torrent, Illumina HiSeq, etc. It supports both single and paired-end reads, and complies to IO file standards, taking inputs in FASTAQ and SFF formats, and generating SAM files as output.
KDBio – Knowledge Discovery and Bioinformatics
- Linux /Windows/ MacOsX
- C Compiler
:: MORE INFORMATION
Fernandes F., da Fonseca P.G., Russo L.M., Oliveira A.L., Freitas A.T.:
Efficient alignment of pyrosequencing reads for re-sequencing applications.
BMC Bioinformatics. 2011 May 16 ; 12(1):163.