Tool
- Cyflogic 1.2.1 – Flow Cytometry Data Analysis Tool
- UGENE 1.11.5 – Integrated Bioinformatics Tools
- Sibelia 2.1.2 – aka Synteny Block ExpLoration tool
- Savant 2.0.3 – Sequence Annotation Visualization & Analysis Tool
- WCD 0.6.3 – DNA Sequence Clustering tool
- Artemis 15.0.6 – Genome Browser and Annotation Tool
- ABMapper 2.0.4 – A suffix-array based Spliced Alignment tool
- FRODOCK 1.04 – Fast Rotational DOCKing tool
- PAINT 1.0_beta60 – Phylogenetic Annotation and INference Tool
- Primer3 2.3.5 / Primer3-web 4.0.0 / Primer3Plus 1.1.0 – PCR Primer Design Tool
- BioGranat 0.1 – Molecular Biology Graph Visualisation and Analysis Tool
- MethFinder – Tissue specific SVM based Methylation Prediction tool
- CrazyQuant – Spot-finding tool
- mMass 5.4.1 – Open Source Mass Spectrometry Tool
- OptiMAS 1.4 – Decision Support tool to conduct Marker-Assisted Selection programs
- PSI-BLAST-ISS 1.04 – The PSI-BLAST Intermediate Sequence Search tool
- PGDSpider 2.0.3.0 – Data conversion tool for Population Genetic and Genomics Programs
- Farsight 0.4.4 – Quantitative Tools for Studying Complex and Dynamic Biological Microenvironments from 4D/5D Microscopy Data
- DPSAT 2.2 – DNA-Protein Sequence Analysis Tool for Android
- MolPrime 1.0.4 – Chemical Structure Drawing Tool for Android
- AutoDock 4.2.5.1 / AutoDockTools 1.5.6 – Suite of Automated Docking Tools
- CUPSAT – Protein Stability Analysis Tool
- refolding 0.1 – Tools for Protein Unfolding and Refolding under the AFM
- Qeseq 0.2.2 – multipurpose ChIP-seq Analysis tool
- Mugsy 1.2.3 – Multiple Whole Genome Alignment tool
- MEDEA – Genomic Visualization Tool with Adobe Flash
- UniGene DLST 1.0 – UniGene Dynamic Local Storage Tool
- PrimerMatch – PCR Primer Alignment Tools
- SCALCE 2.3 – FASTQ Compression tool
- DISSECT 1.0.2 – Transcriptome-to-Genome Alignment Tool
- AbundanceBin 1.0 – Abundance-based tool for Binning Metagenomic Sequences
- GDT – Genome Display Tool
- POSMO v2 – Motif Discovery tool
- XHM – Cross-hybridization tool
- SHOT 2.0 – Shared Ortholog and Gene Order Tree Reconstruction Tool
- GRAST 1.0 – Genome Reduction Analysing Software Tool
- Tool for Biomedical Image Processing & Detection of Cancer using ANN
- KEX 1.21 – A simple Knowledge EXtraction tool
- TraceGD 1.0 – Genetic Disease Prediction tool
- Statmap 0.3.1 – Fast Alignment tool for Mapping Short Reads to a Reference Genome
- PhyloGena 1.04 – Automated Interactive Phylogenetic Annotation Tool
- pantherScore 1.03 – PANTHER HMM Scoring tool
- BioDB-Loader – Lisp tools for bioinformatics
- ALSE 1.07 – Motif Finding Tool
- CopyCat 2.02 – Co-phylogenetic Analysis Tool
- Blast2GO 2.5.1 – Functional Annotation Tool
- MATLIGN 20060524 – Motif Clustering, Comparison and Matching tool
- SmashCommunity 1.6p2 – Metagenomic Analysis and Annotation Tool
- MAMOT 1.0 – hidden MArkov MOdelling Tool
- OptiMage 1.1 – Tool for Producing 3D Layouts of network date
- Twease 20090512 – Web-based tool to Search Medline
- Annotare 1.3 – Tool for Annotating High-throughput Biomedical Investigations and Resulting data
- ExpressConverter 2.1 – Microarray Data Files Transformation Tool
- trimAl 1.4 – Tool for Automated Alignment Trimming
- SBRT 2.0.0 – The Systems Biology Research Tool
- MISA – MIcroSAtellite Identification Tool
- TopKCEMC 1.1 / TopKSpace 1.0 – Rank Aggregation Tool
- mfinder 1.2 – Network Motifs Detection tool
- PRIME 0.9 – Mass Spectrum Data Mining Tool
- GeneViTo – Genome Visualization Tool
- Blossoc 1.4.0 – Whole-genome Association Mapping tool
- GEPAT – Genome Expression Pathway Analysis Tool
- Java Treeview 1.1.6r2 – Gene Expression Visualization Tool
- LifeExplorer 20100108 – 3D Navigation Tool for Cells
- SPC Proteomics Tools 060107 – CDROM Image for SPC tools
- GENtle 1.9.4 – Tool for Genetics and Biochemistry
- YASS 1.14 – Genomic Similarity Search Tool
- Exonerate 2.2 – Generic Tool for Sequence Alignment
- CellExplorer 1.0 – 3D C. elegans atlas Building & Application Tools
- Trebol 20110311 – Interactive Comparative Genomics Tool
- PVT – Phylogenetic Visualization tool
- Primer Prim’er 5.6.0 – PCR Primer Design Tool
- GenomeComp 1.3 – Whole Genome Compare & Visulization Tool
- yrGATE – Gene Structure Annotation Tool
- MAGIC Tool 2.1 – MicroArray Genome Imaging & Clustering Tool
- MAExplorer 0.96.34.01 – MicroArray Explorer Tool
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