SPIA 1.1.0 – SNP Panel Identification Assay

SPIA 1.1.0

:: DESCRIPTION

SPIA is a genetic-based assay for the identification of cell lines

::DEVELOPER

Demichelis Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux /Windows / MacOSX
  • R

:: DOWNLOAD

 SPIA

:: MORE INFORMATION

Citation:

Nucleic Acids Res. 2008 Apr;36(7):2446-56. doi: 10.1093/nar/gkn089. Epub 2008 Feb 27.
SNP panel identification assay (SPIA): a genetic-based assay for the identification of cell lines.
Demichelis F1, Greulich H, Macoska JA, Beroukhim R, Sellers WR, Garraway L, Rubin MA.

SPIA 2.22.0 – Signaling Pathway Impact Analysis

SPIA 2.22.0

:: DESCRIPTION

SPIA is a standard Bioconductor style R package designed to perform pathway analysis using over representation evidence and pathway topology information.

::DEVELOPER

the Bioinformatics and Computational Biology Unit of the Perinatology Research Branch (NICHD)

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows / Linux / MacOS
  • R package
  • Bioconductor

:: DOWNLOAD

 SPIA

:: MORE INFORMATION

Citation

Bioinformatics. 2009 Jan 1;25(1):75-82. doi: 10.1093/bioinformatics/btn577. Epub 2008 Nov 5.
A novel signaling pathway impact analysis.
Tarca AL, Draghici S, Khatri P, Hassan SS, Mittal P, Kim JS, Kim CJ, Kusanovic JP, Romero R.