SULDEX 0.01 – Simultaneous Ultra high throughput Ligand Dissociation EXperiment

SULDEX 0.01

:: DESCRIPTION

The SULDEX packages is designed to use high throughput sequencing to simultaneously analyze binding dissociation constants for large repertoires of sequences.

::DEVELOPER

Pollock Laboratory

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / MacOsX
  • C++ Compiler

:: DOWNLOAD

 SULDEX

:: MORE INFORMATION

Citation

PLoS One. 2011;6(11):e26105. doi: 10.1371/journal.pone.0026105. Epub 2011 Nov 1.
Bayesian analysis of high-throughput quantitative measurement of protein-DNA interactions.
Pollock DD, de Koning AP, Kim H, Castoe TA, Churchill ME, Kechris KJ.

LcaMap – Simultaneous Identification of Duplications, Losses and Lateral Gene Transfers

LcaMap

:: DESCRIPTION

LcaMap is a software for simultaneous identification of duplication, losses and lateral gene transfers. LcaMap takes a gene tree G, a species tree S, and the costs of a lateral gene transfer, a gene duplication, and a gene loss as its input. It outputs all minimum-cost LCA-reconciliations between G and S.

::DEVELOPER

Lusheng Wang

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows / Linux

:: DOWNLOAD

 LcaMap

:: MORE INFORMATION