DR_bind1 – DNA and RNA Binding Residue Prediction Server

DR_bind1

:: DESCRIPTION

DR_bind1 can be used to predict the DNA-binding residues for a given protein chain.

::DEVELOPER

The Institute of Biomedical Sciences, Academia Sinica

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web browser

:: DOWNLOAD

 NO

:: MORE INFORMATION

Citation

Nucleic Acids Res. 2014 Feb;42(3):e15. doi: 10.1093/nar/gkt1299. Epub 2013 Dec 16.
Identifying RNA-binding residues based on evolutionary conserved structural and energetic features.
Chen YC, Sargsyan K, Wright JD, Huang YS, Lim C.

RBRIdent – Identification of RNA-binding Residues in Proteins from primary Sequences

RBRIdent

:: DESCRIPTION

RBRIdent is an algorithm for improved identification of RNA-binding residues in proteins from primary sequences.

::DEVELOPER

Dr. Gong’s Lab

:: SCREENSHOTS

N/a

:: REQUIREMENTS

  • Linux
  • R
  • C++ Compiler

:: DOWNLOAD

  RBRIdent

:: MORE INFORMATION

Citation

Proteins. 2015 Apr 3. doi: 10.1002/prot.24806.
RBRIdent: An algorithm for improved identification of RNA-binding residues in proteins from primary sequences.
Xiong D1, Zeng J, Gong H.

PRBR – Platform for prediction of RNA Binding Residues in Proteins

PRBR

:: DESCRIPTION

PRBR (Prediction of RNA Binding Residues) is proposed for identifying RNA-binding residues from protein sequences which combines a hybrid feature with the enriched random forest (ERF) algorithm.

::DEVELOPER

State Key Laboratory of Bioelectronics , Southeast University

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web Server

:: DOWNLOAD

 NO

:: MORE INFORMATION

Citation:

Proteins. 2011 Apr;79(4):1230-9. doi: 10.1002/prot.22958. Epub 2011 Jan 25.
Prediction of RNA-binding residues in proteins from primary sequence using an enriched random forest model with a novel hybrid feature.
Ma X, Guo J, Wu J, Liu H, Yu J, Xie J, Sun X.