PSP – Prediction of Structural Aspects of Protein Residues

PSP

:: DESCRIPTION

PSP server contains a collection of web services that address several protein structure prediction (PSP) sub-problems. Each of these sub-problems focuses on a single structural feature of a protein and the PSP server is using a Learning Classifier System to predict them for a given sequence of amino acids.

::DEVELOPER

PSP team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web Browser

:: DOWNLOAD

 NO

:: MORE INFORMATION

Citation:

Bioinformatics. 2012 Oct 1;28(19):2441-8. Epub 2012 Jul 25.
Contact map prediction using a large-scale ensemble of rule sets and the fusion of multiple predicted structural features.
Bacardit J, Widera P, Márquez-Chamorro A, Divina F, Aguilar-Ruiz JS, Krasnogor N.

PSP 20120706 – Calculating Prokaryotic Selection Pressure

PSP 20120706

:: DESCRIPTION

PSP: An easy-to-use web tool for rapid identification of orthologous genes with positive selection from set of multiple, closely related prokaryotic genomes.

::DEVELOPER

Fei Su, PhD

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web Browser

:: DOWNLOAD

 NO

:: MORE INFORMATION

Citation

BMC Genomics. 2013 Dec 27;14:924. doi: 10.1186/1471-2164-14-924.
PSP: rapid identification of orthologous coding genes under positive selection across multiple closely related prokaryotic genomes.
Su F, Ou HY, Tao F, Tang H, Xu P