ILM 1.0 – Predict RNA Secondary Structures with Pseudoknots

ILM 1.0

:: DESCRIPTION

 ILM (Iterated Loop Matching) is a web server for predicting RNA secondary structures with pseudoknots.

::DEVELOPER

Jianhua Ruan

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Windows/MacOsX
  • C Compiler

:: DOWNLOAD

 ILM

:: MORE INFORMATION

Citation

Ruan J, Stormo GD and Zhang W.
An Iterated loop matching approach to the prediction of RNA secondary structures with pseudoknots“,
Bioinformatics. 2004 Jan 1;20(1):58-66.

HPknotter – Detecting RNA H-type Pseudoknots

HPknotter

:: DESCRIPTION

HPknotter is a web server for efficiently and accurately detecting the RNA H-type pseudoknots.

::DEVELOPER

Algorithm and Bioinformatics Laboratory, Department of Computer Science, National Tsing Hua University,Taiwan

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web browser

:: DOWNLOAD

 NO

:: MORE INFORMATION

Citation

Bioinformatics. 2005 Sep 1;21(17):3501-8.
A heuristic approach for detecting RNA H-type pseudoknots.
Huang CH, Lu CL, Chiu HT.