PeptideShaker 1.1.3 – Interpretation of Proteomics Identifications from multiple search engines

PeptideShaker 1.1.3

:: DESCRIPTION

PeptideShaker is a search engine independent platform for visualization of peptide and protein identification results from multiple search engines.

::DEVELOPER

The Proteomics Unit at the University of Bergen (PROBE)

:: SCREENSHOTS

:: REQUIREMENTS

  • Windows / Linux
  • Java

:: DOWNLOAD

 PeptideShaker

:: MORE INFORMATION

Citation

Acta Neurol Scand Suppl. 2012;(195):90-6. doi: 10.1111/ane.12029.
Cerebrospinal fluid proteome comparison between multiple sclerosis patients and controls.
Kroksveen AC, Guldbrandsen A, Vedeler C, Myhr KM, Opsahl JA, Berven FS.

SearchGUI 2.0.5 – GUI for Proteomics Identification Search Engines

SearchGUI 2.0.5

:: DESCRIPTION

SearchGUI is a user-friendly, lightweight and open-source graphical user interface for configuring and running two proteomics identification search engines simultaneously, namely the Open Mass Spectrometry Search Algorithm (OMSSA) and X!Tandem.

::DEVELOPER

The Proteomics Unit at the University of Bergen (PROBE)

:: SCREENSHOTS

:: REQUIREMENTS

  • Windows/Linux
  • Java

:: DOWNLOAD

SearchGUI

:: MORE INFORMATION

Citation

Vaudel et al:
SearchGUI: An open-source graphical user interface for simultaneous OMSSA and X!Tandem searches.
Proteomics 2011;11(5):996-9.