PromPredict 200803 – Promoter Identification in Genomic DNA Sequence

PromPredict 200803

:: DESCRIPTION

PromPredict is a tool to identify promoter regions in genomic DNA sequence, based on difference in stability between neighboring regions.

::DEVELOPER

Prof. Manju Bansal Lab, MBU, IISc, Bangalore, India.

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/ Linux / MacOsX

:: DOWNLOAD

 PromPredict

:: MORE INFORMATION

Citation

Mol Biosyst. 2009 Dec;5(12):1758-69.
Relative stability of DNA as a generic criterion for promoter prediction: whole genome annotation of microbial genomes with varying nucleotide base composition.
Rangannan V, Bansal M.

PromoterExplorer – Promoter Identification method based on the AdaBoost algorithm

PromoterExplorer

:: DESCRIPTION

 PromoterExplorer is an effective promoter identification method based on the AdaBoost algorithm.

::DEVELOPER

 Hong Yan , Signal Processing Lab at City University of Hong Kong

:: SCREENSHOTS

N/A

:: REQUIREMENTS

:: DOWNLOAD

  PromoterExplorer

:: MORE INFORMATION

Citation:

Xudong Xie, Shuanhu Wu, Kin-Man Lam and Hong Yan
PromoterExplorer: an effective promoter identification method based on the AdaBoost algorithm
Bioinformatics (2006) 22 (22): 2722-2728.