EigenCorr 0.1 – Control of Population Stratification by Correlation-selected Principal Components

EigenCorr 0.1

:: DESCRIPTION

EigenCorr is a R-package to compute p-values of principal components (PCs) based on EigenCorr1, EigenCorr2 and Tracy-Widom methods.

:DEVELOPER

Seunggeun (Shawn) Lee

:: SCREENSHOTS

N/A

:: REQUIREMENTS

:: DOWNLOAD

 EigenCorr

:: MORE INFORMATION

Citation

Biometrics. 2011 Sep;67(3):967-74. doi: 10.1111/j.1541-0420.2010.01520.x. Epub 2010 Dec 6.
Control of population stratification by correlation-selected principal components.
Lee S, Wright FA, Zou F.

L-POP 1.2 – Analysis Model for Detecting Population Stratification

L-POP 1.2

:: DESCRIPTION

L-POP is a C/C++ program to detect population stratification in samples of unrelated individuals. It uses an approach similar in spirit to that used in STRUCTURE, except it is based on latent class analysis.

::DEVELOPER

Purcell Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows / MacOs / Linux
  • C++ Complier

:: DOWNLOAD

 L-POP

:: MORE INFORMATION

Citation

Purcell S, Sham P.
Properties of structured association approaches to detecting population stratification.
Hum Hered. 2004;58(2):93-107.