PIPs 1.1 – Human Protein-Protein Interaction Predictions

PIPs 1.1

:: DESCRIPTION

PIPs is a database of predicted human protein-protein interactions. The predictions have been made using a na?ve Bayesian classifier to calculate a Score of interaction.

::DEVELOPER

The Barton Group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web Browser

 NO

:: MORE INFORMATION

Citation

PIPs: human protein–protein interaction prediction database
Mark D. McDowall, Michelle S. Scott and Geoffrey J. Barton
Nucl. Acids Res. (2009) 37 (suppl 1): D651-D656. doi: 10.1093/nar/gkn870

PIPS 1.0 – Phylogenetic Inference of Protein Stability

PIPS 1.0

:: DESCRIPTION

PIPS (Phylogenetic Inference of Protein Stability) was used to analyze cold shock protein, ribonuclease HI, thioredoxin, and H1 influenza hemagglutinin

::DEVELOPER

Bloom Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

:: DOWNLOAD

 PIPS

:: MORE INFORMATION

Citation

Jesse D. Bloom and Matthew J. Glassman.
Inferring stabilizing mutations from protein phylogenies: application to influenza hemagglutinin.”
PLoS Comput. Biol. 5:e1000349 (2009)

PIPS 1.1.2 – Pathogenicity Island Prediction Software

PIPS 1.1.2

:: DESCRIPTION

PIPS is a software developed intending to identify Putative Pathogenicity Islands in pathogenic bacteria integrating the prediction of several algorithms.

::DEVELOPER

Siomar Soares et al.

: SCREENSHOTS

N/A

:: REQUIREMENTS

:: DOWNLOAD

 PIPS

:: MORE INFORMATION

Citation

PLoS One. 2012;7(2):e30848. doi: 10.1371/journal.pone.0030848. Epub 2012 Feb 15.
PIPS: pathogenicity island prediction software.
Soares SC, Abreu VA, Ramos RT, Cerdeira L, Silva A, Baumbach J, Trost E, Tauch A, Hirata R Jr, Mattos-Guaraldi AL, Miyoshi A, Azevedo V.