PyRAD 3.0.5 – Assembly of de novo RADseq loci for Phylogenetic Analyses

PyRAD 3.0.5

:: DESCRIPTION

PyRAD is a pipeline to assemble de novo RADseq loci with the aim of optimizing coverage across phylogenetic datasets.

::DEVELOPER

Deren Eaton

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/ MacOsX / Windows
  • Python

:: DOWNLOAD

 PyRAD

:: MORE INFORMATION

Citation

Bioinformatics. 2014 Mar 20.
PyRAD: assembly of de novo RADseq loci for phylogenetic analyses.
Eaton DA.

Phycas 2.2.0 – Phylogenetic Analyses

Phycas 2.2.0

:: DESCRIPTION

Phycas is a Python application for carrying out phylogenetic analyses. Phycas is also a C++ and Python library that can be used to create new applications or to extend the current functionality.

::DEVELOPER

Phycas Team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Mac OsX / Linux / Windows
  • Python
  • C++ Compiler

:: DOWNLOAD

 Phycas

:: MORE INFORMATION

Citation

Syst Biol. 2015 Jan 9. pii: syu132.
Phycas: Software for Bayesian Phylogenetic Analysis.
Lewis PO, Holder MT, Swofford DL