JaDis – Compute Distances between Nucleic Acid Sequences

JaDis

:: DESCRIPTION

JaDis is a program for computing distances between nucleic acid sequences. It allows specific comparison of coding sequences, of non-coding sequences, or of coding and non-coding sequences.

::DEVELOPER

 Atelier de BioInformatique

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/MacOsx/Linux
  • Java

:: DOWNLOAD

 JaDis

:: MORE INFORMATION

Citation

Goncalves I, Robinson M, Perriere G, Mouchiroud D.
JaDis: computing distances between nucleic acid sequences.
Bioinformatics. 1999 May;15(5):424-5.

XplorSeq 2.0.7 – Management of Nucleic Acid Sequences for Phylogenetic Analysis

XplorSeq 2.0.7

:: DESCRIPTION

XplorSeq facilitates the management of nucleic acid sequences for phylogenetic analysis.

::DEVELOPER

Daniel N. Frank, Ph.D

:: SCREENSHOTS

:: REQUIREMENTS

  • MacOsX

:: DOWNLOAD

 XplorSeq

:: MORE INFORMATION

Citation:

Frank DN (2008)
XplorSeq: a software environment for integrated management and phylogenetic analysis of metagenomic sequence data.
BMC Bioinformatics 9: 420.

Seqool 3.1 – Search Biological Signals in Nucleic Acid Sequences

Seqool 3.1

:: DESCRIPTION

Seqool is a free (for educational use) sequence analysis software designed primarily for searching biological signals in nucleic acid sequences. The sequence analysis program package provides several pattern recognition models, but it also includes the most common sequence analysis statistics, such as GC content, codon usage, etc.

::DEVELOPER

Magnus Wang

:: SCREENSHOTS

:: REQUIREMENTS

  • Windows

:: DOWNLOAD

Seqool

:: MORE INFORMATION

Citation

Wang, M. 2011.
Seqool – A sequence analysis tool for signal search, pattern recognition and sequence statistics. Version 3.1,
available at: http://biossc.de/seqool.