MUST v2 – de novo Miniature Inverted Repeat Transposable Element (MITE) Detection Program

MUST v2

:: DESCRIPTION

MUST is an improved de novo detection program for recently active miniature inverted repeat transposable elements (MITEs)

::DEVELOPER

Health Informatics Lab (HILab)

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/ MacOsX
  • Perl

:: DOWNLOAD

 MUST

:: MORE INFORMATION

Citation

Gene. 2009 May 1;436(1-2):1-7. doi: 10.1016/j.gene.2009.01.019. Epub 2009 Feb 10.
MUST: a system for identification of miniature inverted-repeat transposable elements and applications to Anabaena variabilis and Haloquadratum walsbyi.
Chen Y1, Zhou F, Li G, Xu Y.

MITE Digger 1.4 – Genome Wide Discovery of Miniature Inverted Repeat Transposable Elements

MITE Digger 1.4

:: DESCRIPTION

MITE Digger is designed for the de novo retrieval of miniature inverted repeat transposable elements (MITEs) at genomic scales with high accuracy, specificity and efficiency.

::DEVELOPER

Yang Lab

:: SCREENSHOTS

MITEDigger

:: REQUIREMENTS

  • Windows

:: DOWNLOAD

 MITE Digger

:: MORE INFORMATION

Citation:

BMC Bioinformatics. 2013 Jun 7;14:186. doi: 10.1186/1471-2105-14-186.
MITE Digger, an efficient and accurate algorithm for genome wide discovery of miniature inverted repeat transposable elements.
Yang G