CellTracker 1.0.3 – Cell Migration Detection

CellTracker 1.0.3

:: DESCRIPTION

is an image processing software to perform automated, semi-automated, and manual cell migration detection.

::DEVELOPER

CellTracker team

:: SCREENSHOTS

CellTracker

:: REQUIREMENTS

  • Linux / Windows / MacOsX
  • MatLab

:: DOWNLOAD

 CellTracker

:: MORE INFORMATION

Citation

CellTracker (not only) for dummies.
Piccinini F, Kiss A, Horvath P.
Bioinformatics. 2015 Nov 20. pii: btv686.

BayesAssNM 1.0 – Bayesian Inference of Recent Migration Using Multilocus Genotypes (Migrants Not Included In the Sample)

BayesAssNM 1.0

:: DESCRIPTION

BayesAssNM is a program that estimates recent migration rates between populations using MCMC.

::DEVELOPER

Rannala Research Group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

 BayesAssNM

:: MORE INFORMATION

Citation

Jehle R, GA Wilson, JW Arntzen, and T Burke. 2005.
Contemporary gene flow and the spatio-temporal genetic structure of subdivided newt populations (Triturus cristatus, T. marmoratus).
J Evol Biol. 2005 May;18(3):619-28.

BayesAss 3.03 -Bayesian Inference of Recent Migration Using Multilocus Genotype

BayesAss 3.03

:: DESCRIPTION

BayesAss is a software that uses individual multilocus genotypes to estimate rates of recent immigration (over the last several generations) among populations is presented. The software also estimates the posterior probability distributions of individual immigrant ancestries, population allele frequencies, population inbreeding coefficients, and other parameters of potential interest.

::DEVELOPER

Rannala Research Group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux /  Windows

:: DOWNLOAD

 BayesAss

:: MORE INFORMATION

Citation

G.A. Wilson and B. Rannala 2003.
Bayesian inference of recent migration rates using multilocus genotypes.
Genetics 163: 1177-1191.

GelyMac – Calculate DNA Fragment sizes from Gel Electrophoresis Migration data

GelyMac

:: DESCRIPTION

GelyMac is a program developed at Reed College which calculates DNA fragment sizes from gel electrophoresis migration data. GelyMac runs on a Macintosh computer only. The first step in using the GelyMac program is to enter data for a known marker. Both the distances traveled and the fragment sizes are entered. Then the distances migrated by up to 19 sets of DNA fragments are entered, and the program calculates the sizes of these fragments using a cubic-spline interpolation. These results are displayed on the screen and may also be printed.

::DEVELOPER

Biology Department, Reed College

:: SCREENSHOTS

N/A

::REQUIREMENTS

  • MacOsX

:: DOWNLOAD

 GelyMac

:: MORE INFORMATION

Citation

Peter J. Russell, Joshua M. Doenias and Steven J. Russell
GELYMAC: a Macintosh application for calculating DNA fragment size from gel electrophoresis migration data
Comput Appl Biosci (1991) 7 (2): 265-266.