PSS-SQL – Protein Secondary Structure Similarity Searching in Microsoft SQL Server

PSS-SQL

:: DESCRIPTION

PSS-SQL language allows searching a database in order to identify proteins having secondary structure similar to the structure specified by the user in a PSS-SQL query.

::DEVELOPER

Dariusz Mrozek

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows
  • Microsoft SQL Server 2012
  • Transact-SQL, C#

:: DOWNLOAD

   PSS-SQL

:: MORE INFORMATION

Citation

Conf Proc IEEE Eng Med Biol Soc. 2010;2010:1073-6. doi: 10.1109/IEMBS.2010.5627303.
PSS-SQL: protein secondary structure – structured query language.
Mrozek D1, Wieczorek D, Malysiak-Mrozek B, Kozielski S.

BioSequenceAssembler 2.0 – Microsoft Research Sequence Assembler

BioSequenceAssembler 2.0

:: DESCRIPTION

BioSequenceAssembler is intended for use by biologist and laboratory technicians who are responsible for managing next-generation genomic sequencing data for alignment, assembly, and/or BLAST identification.

::DEVELOPER

Microsoft Biology Initiative

:: SCREENSHOTS

BioSequenceAssembler

:: REQUIREMENTS

  • Windows
  • .NET

:: DOWNLOAD

   BioSequenceAssembler

:: MORE INFORMATION

BioExcel 2.0 – Microsoft Research Biology Extension for Excel

BioExcel 2.0

:: DESCRIPTION

BioExcel is for biologists who are interested in, or already using, Microsoft Excel for their research. The extensible nature of Excel lends itself to the creation of a custom ribbon component labeled “Bioinformatics” in the top menu bar of the application. Through this customization, all the usual features of Excel remain available, but the biologist now has access to additional dedicated bioinformatics features as well. The Biology Extension can also be extended by developers to use other features in .NET Bio. Developers can write custom bioinformatics applications by using the libraries of .NET Bio and can add UI elements for those applications to the Biology Extension.

::DEVELOPER

Microsoft Biology Initiative

:: SCREENSHOTS

BioExcel

:: REQUIREMENTS

  • Windows
  • .NET
  • Excel

:: DOWNLOAD

   BioExcel

:: MORE INFORMATION