Microarray Data
- Echidna 2.0 – Repository for Microarray data
- Genetrix 3.62 – Analysis of Microarray Data
- MethLAB 1.5 – Analysis of DNA Methylation Microarray data
- OSCAR – Clustering Analysis, and Cross-species Analysis of Microarray data
- MicroPreP – Microarray data Preprocessing framework
- GeneCruiser 3.2.2 – Annotation of Microarray data
- GoSurfer 2.0 – Graphical Data Mining tool for Microarray data using Gene Ontology Information
- RPS 1.0 – Reproducibility Probability Score for Microarray Data
- Diurnal 2.0 – Mining and Viewing Diurnal and Circadian Microarray data for Arabidopsis thaliana, poplar, and rice
- MADIBA – MicroArray Data Interface for Biological Annotation
- MicroarrayRUS 1.0 – Analysis of Microarray data
- PageMan 0.12 – Annotates, Investigates, and Condenses Microarray data in the Context of Functional Ontologies
- CpGassoc 1.3 – Analysis of DNA Methylation Microarray data
- WebArray 1.4 – Web platform for analysis of Microarray data
- DetectiV 1.1 – Analysis of Pathogen Detection Microarray data
- Genesis 1.7.6 / GenesisServer 1.1.0 – Cluster Analysis of Microarray data
- Decision Forest 2 – Novel Pattern Recognition method for multiclass Classification in Microarray data analysis
- MDCS – Microarray Data Classification Server
- geneCBR – Perform Cancer Classification based on Microarray data
- TFInfer 1.0 – Inference of Transcription Factor Activities from Microarray data
- Knorm 1.0 – Microarray Data From Multiple Biologically Interrelated Experiments
- MSCLtoolbox 200902 – Statistical Analysis of Microarray data
- ExpressConverter 2.1 – Microarray Data Files Transformation Tool
- CALIB 1.2.0 – Estimate absolute Expression levels from two color Microarray data
- ReMoDiscovery – Inferring Transcriptional Module networks from ChIP-chip-, motif- and microarray data
- ErmineJ 2.1.21 – Analysis of Gene sets in Expression Microarray data
- KNNimpute – Estimation of Missing Values in Microarray data
- ChARMview 1.8 – Visualization-based Discovery and Analysis of Genomic Abberations in Microarray data
- GSE – Database System for the Representation, Retrieval, and Analysis of Microarray data
- VIMIDA – Java-applet for VIsualization of MIcroarray DAta
- A-MADMAN 1.4 – Annotation-based Microarray Data Meta-ANalysis tool
- iMISS 1.0 – Integrative Missing Value Estimation for Microarray Data
- GEDI 2.1 – Analysis of Microarray Data
- GENECLUST 1.0.1 – Exploratory Analysis of Gene Expression Microarray data
- ComBat – Batch Effects when Combining Batches of Microarray data
- TightClust 1.0 – Resampling Based Clustering Method for Microarray data
- PeakFinder 1.0 – Find Cohesin Binding Sites in Yeast ChIP Microarray Data
- ArrayPipe 1.7 – Processing & Analysis of Microarray Data
- EVE v04 – Detect Differentially Expressed Genes using Microarray Data
- maxd 2.0 – Storage & Analysis of Microarray Data
- MAGNOLIA 1.2 – Microarray Data Management & Export System for PFGRC Microarrays
- GeneXplorer 0.11 – Microarray Data Web Browser
- ENIGMA 1.1 – Extract Gene Expression Modules from Perturbational Microarray Data
- NIA Array Analysis Tool 2.0 – Statistical Significance Analysis of Microarray Data


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