GenomeMapper 0.4.4 – Short Read Mapping tool

GenomeMapper 0.4.4

:: DESCRIPTION

GenomeMapper is a short read mapping tool designed for accurate read alignments. It quickly aligns millions of reads either with ungapped or gapped alignments. It can be used to align against multiple genomes simulanteously or against a single reference. If you are unsure which one is the appropriate GenomeMapper, you might want to use the latter.

:DEVELOPER

Dept. Weigel

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • C Compiler

:: DOWNLOAD

 GenomeMapper

:: MORE INFORMATION

Citation

Genome Biol. 2009;10(9):R98. Epub 2009 Sep 17.
Simultaneous alignment of short reads against multiple genomes.
Schneeberger K, Hagmann J, Ossowski S, Warthmann N, Gesing S, Kohlbacher O, Weigel D.

Mapping Tool 1.3 – Map Different Nomenclatures

Mapping Tool 1.3

:: DESCRIPTION

Mapping Tool is a tool to assist name mapping if different nomenclatures are used by different models (e.g. metabolic networks).

::DEVELOPER

The Computational Systems Biology Group

:: SCREENSHOTS

:: REQUIREMENTS

  • Windows / Mac /  Linux
  • Java

:: DOWNLOAD

 Mapping Tool

:: MORE INFORMATION