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RAxML 7.4.2 / RAxML Workbench 1.0 – Sequential and Parallel Maximum Likelihood based inference of large phylogenetic trees
TreePlus 20060630 – Explore Large, Complex Food Webs
Baobab 3.31 – Editor for Large Phylogenetic Trees
STC 1.2 – Reconstruct Large Phylogenies
ProfDistS 0.9.9 beta – Construction of Large Phylogenetic Trees

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