PR-PR 1.1 – Laboratory Automation Platform

PR-PR 1.1

:: DESCRIPTION

PR-PR is a cloud-based freely open-source laboratory automation programming platform that allows researchers to time-effectively use liquid-handling robots and microfluidic devices.

::DEVELOPER

The Joint BioEnergy Institute

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • Python

:: DOWNLOAD

 PR-PR

:: MORE INFORMATION

Citation

ACS Synth Biol. 2014 Aug 15;3(8):515-24. doi: 10.1021/sb4001728. Epub 2014 Jan 14.
PR-PR: cross-platform laboratory automation system.
Linshiz G, Stawski N, Goyal G, Bi C, Poust S, Sharma M, Mutalik V, Keasling JD, Hillson NJ.

IOCBio 1.2.2 – Open-source Software from the Laboratory of Systems Biology

IOCBio 1.2.2

:: DESCRIPTION

The IOCBio project provides open-source software that is developed in Laboratory of Systems Biology at Institute of Cybernetics. The project is created to publish the software, this includes distributing the source codes, continuing software development, supporting users as well as attracting users to contribute to the software.

::DEVELOPER

Laboratory of Systems Biology at Institute of Cybernetics.

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Windows / MacOsX
  • Python

:: DOWNLOAD

IOCBio

:: MORE INFORMATION

Citation

J Microsc. 2011 Aug;243(2):124-40. doi: 10.1111/j.1365-2818.2011.03486.x. Epub 2011 Feb 15.
Application of regularized Richardson-Lucy algorithm for deconvolution of confocal microscopy images.
Laasmaa M, Vendelin M, Peterson P.

SLIMS 1.0.0 – Sample-based Laboratory Information Management System

SLIMS 1.0.0

:: DESCRIPTION

SLIMS is a powerful and user-friendly open source web application that provides all members of a laboratory with an interface to view, edit, and create sample information. SLIMS aims to simplify common laboratory tasks with tools such as a user-friendly shopping cart for subjects, samples and containers that easily generates reports, shareable lists, and plate designs for genotyping.

::DEVELOPER

Genapha

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • Apache
  • MySQL

:: DOWNLOAD

 SLIMS

:: MORE INFORMATION

Citation:

Bioinformatics. 2010 Jul 15;26(14):1808-10. doi: 10.1093/bioinformatics/btq271. Epub 2010 May 30.
SLIMS–a user-friendly sample operations and inventory management system for genotyping labs.
Van Rossum T1, Tripp B, Daley D.

Labmatica 2.2.3 RC1 – Laboratory Information Management System

Labmatica 2.2.3 RC1

:: DESCRIPTION

Labmatica is a Laboratory Information Management System ( LIMS ). With Labmatica you can: manage samples; create sample types from methods & parameters; easily generate reports & certificates; fine tune user rights. Ready made reports and certificates are included in the distribution. You can easily configure these report templates to your corporate identity.

::DEVELOPER

LIMS at work GmbH

:: SCREENSHOTS

:: REQUIREMENTS

:: DOWNLOAD

Labmatica

:: MORE INFORMATION

Buy Labmatica LIMS

iLAP 1.3.3 – Laboratory Data Management, Analysis and Protocol Development

iLAP 1.3.3

:: DESCRIPTION

 iLAP (Laboratory data management, Analysis and Protocol development) combines experimental protocol development, wizard-based data acquisition and high-throughput data analysis into one single, integrated system.

::DEVELOPER

Genomics & Bioinformatics Graz, Graz University of Technology

:: SCREENSHOTS

:: REQUIREMENTS

  • Windows / Linux / MacOsX
  • PostgreSQL
  • JEE
  • Apache Tomcat

:: DOWNLOAD

  iLAP

:: MORE INFORMATION

Citation

Stocker G, Fischer M, Rieder D, Bindea G, Kainz S, Oberstolz M, McNally JG and Trajanoski Z,
iLAP: a workflow-driven software for experimental protocol development, data acquisition and analysis,
BMC Bioinformatics, 2009 Nov 10(6)

Virtlab 1.3 – Simulate Molecular Biology Laboratory

Virtlab 1.3

:: DESCRIPTION

VIRTLAB is a self-training program based on PBL (Problem-Based- Learning Pathway) built to simulate a molecular biology laboratory. It has been designed to stimulate students in the biological sciences to analyse and solve molecular biology problems using standard laboratory techniques (e.g. restriction enzyme digestions, analytical and preparative agarose gels, DNA cloning and sequencing, etc.) and can thus be viewed as a teaching aid.

::DEVELOPER

G Iazzetti, G Santini, M Rau, E Bucci and R A Calogero

:: SCREENSHOTS

:: REQUIREMENTS

  • Windows

:: DOWNLOAD

Virtlab

:: MORE INFORMATION

Citation

Iazzetti G., Santini G., Rau M., Bucci E., Calogero R. A.
VIRTLAB: a virtual molecular biology laboratory.
Bioinformatics, vol.14 n.9 pp:815-816 (1998)