Jane 4.01 – Cophylogeny Reconstruction

Jane 4.01

:: DESCRIPTION

Jane is a software tool for the cophylogeny reconstruction problem.

::DEVELOPER

Professor Ran Libeskind-Hadas

:: SCREENSHOTS

Jane

::REQUIREMENTS

  • Windows/Linux/MacOsX
  • JRE

:: DOWNLOAD

 Jane

:: MORE INFORMATION

Citation

Jane: a new tool for the cophylogeny reconstruction problem.
Conow C, Fielder D, Ovadia Y, Libeskind-Hadas R.
Algorithms Mol Biol. 2010 Feb 3;5:16. doi: 10.1186/1748-7188-5-16.

Jane – Journal / Author Name Estimator

Jane

:: DESCRIPTION

Just enter the title and/or abstract of the paper in the box, and click on ‘Find journals’ or ‘Find authors’. Jane will then compare your document to millions of documents in Medline to find the best matching journals or authors.

::DEVELOPER

the Biosemantics Group.

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web Browser

:: DOWNLOAD

 NO

:: MORE INFORMATION

Citation

Bioinformatics. 2008 Mar 1;24(5):727-8. doi: 10.1093/bioinformatics/btn006. Epub 2008 Jan 28.
Jane: suggesting journals, finding experts.
Schuemie MJ, Kors JA.

JANE – EST Analyzer

JANE

:: DESCRIPTION

JANE (Just Analyze Nucleotides and ESTs) provides a feasible plan for rapid analysis of EST sequences using a related genome as template to align all the ESTs. The homology modeling results in a virtual genome, with annotation for systematical analysis.

::DEVELOPER

JANE Team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web Browser

:: DOWNLOAD

 NO

:: MORE INFORMATION

Citation

BMC Bioinformatics. 2009 Nov 29;10:391.
JANE: efficient mapping of prokaryotic ESTs and variable length sequence reads on related template genomes.
Liang C, Schmid A, López-Sánchez MJ, Moya A, Gross R, Bernhardt J, Dandekar T.