Enrichr – HTML5 Gene List Enrichment Analysis Tool

Enrichr

:: DESCRIPTION

Enrichr is an integrative web-based and mobile gene-list enrichment analysis tool that includes over 30 gene-set libraries, an alternative approach to rank enriched terms, and various interactive visualization approaches to display enrichment results using the JavaScript library Data Driven Documents (D3).

::DEVELOPER

Ma’ayan Laboratory

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web Browser

:: DOWNLOAD

 NO

:: MORE INFORMATION

Citation

BMC Bioinformatics. 2013 Apr 15;14:128. doi: 10.1186/1471-2105-14-128.
Enrichr: interactive and collaborative HTML5 gene list enrichment analysis tool.
Chen EY, Tan CM, Kou Y, Duan Q, Wang Z, Meirelles GV, Clark NR, Ma’ayan A.
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Jolecule 2.0 – HTML5 Web-based Three-Dimensional Protein and DNA Renderer

Jolecule 2.0

:: DESCRIPTION

Jolecule is a HTML5 viewer for protein molecules. It is written in Javascript and is designed to be deployed on web pages. Jolecule provides a plugin mode that is meant to work in embedded in an arbitrary web page.

::DEVELOPER

Bosco Ho.

:: SCREENSHOTS

Jolecule

:: REQUIREMENTS

  • HTML5 suportted Web Browser 

:: DOWNLOAD

 Jolecule

:: MORE INFORMATION

HTML5 PivotViewer 1.0 – A HTML5 Data Exploration Tool for Image based data sets

HTML5 PivotViewer 1.0

:: DESCRIPTION

HTML5 PivotViewer is a novel, open source, platform-independent viewer making use of the latest web technologies that allows seamless access to images and associated metadata for each image.

::DEVELOPER

The Computational Biology Research Group (CBRG)

:: SCREENSHOTS

PivotViewer

:: REQUIREMENTS

  • HTML5 Web Browser

:: DOWNLOAD

 HTML5 PivotViewer

:: MORE INFORMATION

Citation:

Bioinformatics. 2014 May 21. pii: btu349. [Epub ahead of print]
HTML5 PivotViewer: High throughput visualisation and querying of image data on the web.
Taylor S1, Noble R2.

Scribl 1.1.4 – HTML5 Canvas Genomics Graphic Library

Scribl 1.1.4

:: DESCRIPTION

Scribl is a javascript, Canvas-based graphics library that easily generates biological visuals of genomic regions, alignments, and assembly data. Scribl can also be used in conventional offline pipelines, since everything needed to generate charts can be contained in a single html file.

::DEVELOPER

the Meyer Lab 

:: SCREENSHOTS

:: REQUIREMENTS

  • Linux / Windows / Mac OsX
  • Java 

:: DOWNLOAD

  Scribl

:: MORE INFORMATION

Citation

Bioinformatics. 2013 Feb 1;29(3):381-3. doi: 10.1093/bioinformatics/bts677. Epub 2012 Nov 19.
Scribl: an HTML5 Canvas-based graphics library for visualizing genomic data over the web.
Miller CA, Anthony J, Meyer MM, Marth G.