HGTector 0.2.1 – Detection of Candidate HGT-derived Genes

HGTector 0.2.1

:: DESCRIPTION

HGTector is a computational pipeline for genome-wide detection of putative horizontal gene transfer (HGT) events based on sequence homology search hit distribution statistics.

::DEVELOPER

Dittmar Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • Perl

:: DOWNLOAD

 HGTector

:: MORE INFORMATION

Citation

BMC Genomics. 2014 Aug 26;15:717. doi: 10.1186/1471-2164-15-717.
HGTector: an automated method facilitating genome-wide discovery of putative horizontal gene transfers.
Zhu Q, Kosoy M, Dittmar K.

HGT – Simulate and Estimate Horizontal Gene Transfer events

HGT

:: DESCRIPTION

HGT is a software to simulate and estimate Horizontal Gene Transfer events.

::DEVELOPER

 the Center of Integrative Bioinformatics Vienna (CIBIV) headed by Arndt von Haeseler.

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

 HGT

:: MORE INFORMATION

Citation:

Simone Linz, Achim Radtke, Arndt von Haeseler
A Likelihood Framework to Measure Horizontal Gene Transfer
Molecular Biology and Evolution, 24:1312-1319, 2007.