MouseDivGeno 1.0.4 – Genotype the Mouse Diversity Genotyping Array

MouseDivGeno 1.0.4

:: DESCRIPTION

MouseDivGeno is a R package specifically designed to genotype the Mouse Diversity Genotyping Array, an Affymetrix mouse genotyping array similar to the human SNP 6.0. MouseDivGeno contains functions which allow you to perform genotyping, identify probe sets potentially harboring a new mutation (Variable INtensity Oligonucleotide or VINO, here we call it a vinotyping) and perform CNV analysis.

::DEVELOPER

The Churchill Group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

:: DOWNLOAD

  MouseDivGeno

:: MORE INFORMATION

Citation

BMC Genomics. 2012 Jan 19;13:34.
Discovery of novel variants in genotyping arrays improves genotype retention and reduces ascertainment bias.
Didion JP, Yang H, Sheppard K, Fu CP, McMillan L, de Villena FP, Churchill GA.