SPEC – Cell Subset Prediction for Blood Genomic Studies

SPEC

:: DESCRIPTION

SPEC is a computational method to predict the cellular source for a pre-defined list of genes (i.e., a gene signature) using gene expression data from total PBMCs

::DEVELOPER

Kleinstein Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/Linux
  • R

:: DOWNLOAD

SPEC

:: MORE INFORMATION

Citation

Bolen CR, Uduman M, Kleinstein SH.
Cell subset prediction for blood genomic studies.
BMC Bioinformatics. 2011 Jun 24;12:258.

ManhattanPlotter 1.4 – Create Manhattan Plots and qq plots from P-values obtained in Genomic Studies

ManhattanPlotter 1.4

:: DESCRIPTION

ManhattanPlotter is a visual application developed in JAVA that easily creates Manhattan plots and qq plots from p-values obtained in genomic studies.

::DEVELOPER

Carlos Morcillo Suarez

:: SCREENSHOTS

ManhattanPlotter

:: REQUIREMENTS

  • Linux/ WIndows/MacOsX
  • Java

:: DOWNLOAD

 ManhattanPlotter

:: MORE INFORMATION