Pathprinting 1.2.3 – Pathway Fingerprinting for Analysis of Gene Expression Arrays

Pathprinting 1.2.3

:: DESCRIPTION

Pathprinting integrates pathway curation, profiling methods, and public repositories, to represent any expression profile as a ternary score (-1, 0, +1) in a standardized pathway panel.

::DEVELOPER

Hide Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/ MacOsX/Windows
  • R

:: DOWNLOAD

  Pathprinting

:: MORE INFORMATION

Citation

Genome Med. 2013 Jul 26;5(7):68. doi: 10.1186/gm472. eCollection 2013.
Pathprinting: An integrative approach to understand the functional basis of disease.
Altschuler GM, Hofmann O, Kalatskaya I, Payne R, Ho Sui SJ, Saxena U, Krivtsov AV, Armstrong SA, Cai T, Stein L, Hide WA

PFFF 1.0 – Probabilistic Fast File Fingerprinting

PFFF 1.0

:: DESCRIPTION

PFFF is an open-source command-line tool for performing file fingerprinting.

::DEVELOPER

PFFF team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/ Windows

:: DOWNLOAD

 PFFF

:: MORE INFORMATION

Citation

BMC Genomics. 2013;14 Suppl 2:S8. doi: 10.1186/1471-2164-14-S2-S8. Epub 2013 Feb 15.
Fast probabilistic file fingerprinting for big data.
Tretyakov K1, Laur S, Smant G, Vilo J, Prins P.

PyPLIF 0.1.1 – Python-based Protein-Ligand Interaction Fingerprinting

pyplif 0.1.1

:: DESCRIPTION

PyPLIF is a program/script written in Python to analyze protein-ligand interaction from the molecular docking result.

::DEVELOPER

Muhammad Radifar

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows / MacOsX / Linux
  • Python

:: DOWNLOAD

  pyplif 

:: MORE INFORMATION

Citation:

Bioinformation. 2013;9(6):325-8. doi: 10.6026/97320630009325. Epub 2013 Mar 19.
PyPLIF: Python-based Protein-Ligand Interaction Fingerprinting.
Radifar M, Yuniarti N, Istyastono EP.