DSS 2.32.0 – Dispersion Shrinakge for Sequencing data

DSS 2.32.0

:: DESCRIPTION

DSS is an R library performing differntial analysis for count-based sequencing data. It detectes differentially expressed genes (DEGs) from RNA-seq, and differentially methylated loci or regions (DML/DMRs) from bisulfite sequencing (BS-seq).

::DEVELOPER

Hao Wu, Ph.D.

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows /Linux/ MacOsX
  • R
  • BioConductor

:: DOWNLOAD

  DSS

:: MORE INFORMATION

Citation

Differential methylation analysis for BS-seq data under general experimental design.
Park Y, Wu H.
Bioinformatics. 2016 Jan 27. pii: btw026

Wu H, Wang C and Wu Z
A new shrinkage estimator for dispersion improves differential expression detection in RNA-seq data.
Biostat (2013) 14 (2): 232-243. http://dx.doi.org/10.1093/biostatistics/kxs033.

GUARDD 20110911 – Graphical User-friendly Analysis of Relaxation Dispersion Data

GUARDD 20110911

:: DESCRIPTION

GUARDD  is designed to organize, automate, and enhance the analytical procedures which operate on CPMG RD NMR data.

::DEVELOPER

Foster Group

:: SCREENSHOTS

GUARDD

:: REQUIREMENTS

  • MacOsX/ Windows
  • MatLab

:: DOWNLOAD

 GUARDD

:: MORE INFORMATION

Citation

J Biomol NMR. 2012 Jan;52(1):11-22. doi: 10.1007/s10858-011-9589-y. Epub 2011 Dec 11.
GUARDD: user-friendly MATLAB software for rigorous analysis of CPMG RD NMR data.
Kleckner IR1, Foster MP.