Data
- SHORE 0.8.1 – Analysis Suite for Illumina Short Read Data
- QUALIFIER 1.3.7 – Qualitiy Control for Gated Flow Cytometry data
- BRB-ArrayTools 4.3.0 Beta3 – Visualization & Analysis of DNA Microarray Gene Expression Data
- BIC-seq 2.1.1 – Copy Number analysis from Whole-genome Sequencing data
- DynaFit 4.05.063 – Enzyme Kinetic Data Analysis
- cMonkey 1.1 – Biclustering from Diverse System Biology Data
- Paxtools 4.1.6 – Java Library for Accessing & Manipulating BioPAX Data
- Grape 1.9.4 – Pipeline for Processing and Analyzing RNA-Seq data
- BioAnalyzer 2100 – Analysis of BioAnalyzer data
- NGC 0.0.1 – Compressor for High-throughput Sequencing data
- LinRegPCR 2013.03.28 – Analysis of Quantitative PCR Data
- Q-Gene 1.2 – Process Quantitative Real-time RT-PCR Data
- SNPTools 1.0 – SNP analysis in Next Generation Sequencing data
- HapSeq 2 – Haplotype Phasing and Genotype Calling from Next Generation Sequencing Data Using Haplotype Information of Jumping Reads
- miRNA-MATE – A mapping pipeline for SOLiD miRNA data
- EmblEx 20121203 – Parse and Extract data from EMBL entries to various formats
- BEBaC 20130114 – Estimate Bacterial Community Composition from 454 Sequencing data
- parse-mif25 1.0 – Parse Protein-protein Interaction data in MIF v2.5 format
- mseq 1.2 – Modeling non-uniformity in Short-read Rates in RNA-Seq data
- chipchipnorm 1.0.1 – Normalize 2-color Microarray Data
- HiTEC 20110131 – Accurate Error Correction in High-throughput Sequencing data
- BANANAS – Infer Population Trees based on Molecular Marker data
- Istvan – Normalisation of Expression Data
- Transposon Express 1.1.6 – Rapid analysis of Mutagenesis data
- FPCBrowser 1.5 – Analyze Clone Pooling data
- miRNAkey 1.2 – Analysis of microRNA Deep Sequencing data
- FISH Oracle – Visualize Data from multiple Array CGH or SNP Array Experiments
- Judi 1.0 – Data and Model Integration for Biology
- waviCGH – Server Application for the Analysis and Visualization of Array-CGH data
- Cromwell 1.0 – The New Model Processor for Mass Spectrometry Data
- sel2Ns – Estimate 2Ns from Temporal Allele Frequency Data
- VAMPIRE – Interpret Microarray Gene Expression Data
- Prometheus 0.8.0 – Storage, Management, and Analysis of Fermentation data
- AffyGCQC 1.02 – GeneChip Data Quality Control
- J-Express 2012 – Analysis and Visualization of Microarray Data
- ESPRIT-Tree – Hierarchical Clustering Analysis of Massive Sequence data
- popoolation 1.2.2 – Analyse Pooled Next Generation Sequencing data
- GQL 1.0 – GHMM-based tool for Querying and Clustering Gene-Expression time-course data
- FunCluster 1.07 – Functional Analysis of Gene Expression data
- KaPPA-Average 1.0 – Convert Probe ID-based Gene Expression data to Gene ID-based Data
- PyParaTools – Software for working with paramagnetic NMR data
- ChromatoGate 1.2 – Analyze / Edit Chromatogram data
- exploRase 1.4.0 – Exploratory Multivariate analysis of Systems Biology data
- Cyber-T – Software and Server for Analysis of DNA Microarray data
- LAILAPS – Search Engine for Life Science data
- Author tool 4.0 – Input data into Reactome
- CFinder 2.0.5 – Cluster data represented by Large Graphs
- Celsius – Community Resource for Affymetrix Microarray data
- qPCR-DAMS 1.2 – Analyze, Manage, and Store Quantitative Real-Time PCR data.
- GenEx 5.3.6 – Analyze Real-time qPCR Data
- BLISS 0.7 – Identify Batch Effects in RNA Expression Data
- FCAnalysis 1.0.0 – Independent Component Analysis for Mining Gene Expression Data
- CGH-Plotter 20051025 – MATLAB Toolbox for CGH-data Analysis
- WinDig 2.5 – Image Data Digitizer
- GPeriodic 2.0.10 – Look up Data of Elements from the Periodic Table
- G3data 1.5.4 – Extract Data from Graphs
- PCAGEN 1.2.1 – Perform Principal Component Analysis on Gene Frequency Data
- YCDMA 3.1.1 – Manage Microsatellite Data
- DnaSP 5.10.01 – Analysis of Nucleotide Polymorphism from Aligned DNA Sequence Data
- MFI 3.4kb8 – Analysis of Flow Cytofluorometry Data
- HAPSIM – Produce the Case-control Multilocus Genotype Data
- NNPERM 1.3 – Analyse Case-control Multi-locus Genotype Data
- BioGridRunner 2002 – Bioinformatics Data Grid Application
- ChromA 0.9 – Alignment for Chromatography Mass Spectrometry Data
- GenePublisher 1.03 – Analysis of DNA Microarray Data
- AMIADA 2.0.7 – Analysis of Microarray Data


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