Cluster
- StructHDP – Inference of number of Clusters and Population Structure from Admixed Genotype data.
- MCODE 1.32 – Cytoscape plugin that finds Clusters in a Network
- RNAclust 1.3 – Cluster RNAs based on Secondary Ctructures
- clusterMaker 1.10 – Creat and Visualize Cytoscape Clusters
- Qgrid – Identify Clusters of Charged and Hydrophobic Regions in Proteins
- CCRXP – Identifies Clusters of Conserved Residues in Proteins using PDB files
- Paraclu 9 – Find Clusters in Data attached to Sequences
- DNACLUST r2 – Cluster Millions of short DNA sequences
- SeqGrapheR 0.4.8.2 – Graph based Visualization of Cluster of DNA sequence reads
- pClust 1.0 – Parallel Identification of Dense Protein Clusters
- CAFS 1.0 – Cluster of Functional Shifts
- Trixy – Cluster of various types of Gene Expression data
- BlastR 2.2 – Searching and Clustering RNA
- CD-HIT 4.6.1 – Cluster Large Protein database at High Sequence Identity Threshold
- GICL 0.01 – Cluster & Assembly of a large EST/mRNA dataset
- ClusterViz 0.2 – Cluster Visualisation
- DISCLOSE 1.0.0 – DISsection of CLusters Obtained by SEries of transcriptome data
- PATTERN CLUSTERING 20060220 – Cluster a set of DNA patterns
- CTree 1.03 – Analysis of Clusters on Phylogenetic Trees
- Spark 1.1.0 – Interactive Cluster Visualization Tool
- TreeView 1.66 – Cluster Results Visualization Software
- CFinder 2.0.5 – Cluster data represented by Large Graphs
- Modk-Prototypes – Clusters Biological Samples
- KegArray 1.2.3 – Microarray Data Analysis & Cluster
- Network Motif Clustering Toolbox 2.0 – Cluster Topological Network Motif
- GaneSh – Cluster Expression Data by Gibbs sampling procedure
- OSCAR 6.1.1 – Open Source Cluster Application Resources
- SPICKER 20101229 – Cluster Protein Structures for Near-native Model Selection
- PSbR – Test Evolution and Conservation of Common Clusters of Genes
- MarVis Suite 1.0 – Clustering & Visualization of Metabolomic Markers
- MotifOrganizer 0.1 Beta – Cluster large sets of DNA sequence motifs to identify common patterns
- CRC 1.1 – Dirichlet Process Model-based Cluster
- TreeChopper 20090606 – Cluster Tree Leaf Nodes According to Phylogenetic Distance
- CLOBB 2.0 – Cluster Sequences on the Basis of BLAST
- Cister – Find Motif Clusters in DNA Sequences
- COMET – Cluster Of Motifs E-value Tool
- Cluster 1.3 – Build Collections of Interacting Items
- PermutMatrix 1.9.3 – Microarray Data Cluster & Seriation Analysis
- MAGIC Tool 2.1 – MicroArray Genome Imaging & Clustering Tool
- Samster 2.0 – SAM to Cluster
- Cluster 3.0 2010.12.27 – Enhanced Version of Cluster
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