Calculate
- GrowthRates 1.7 – Calculates Bacterial Growth Rates
- MSTgold 2.2 – Calculates Minimum Spanning Trees
- TAP 1.8 – Calculate TAP and TAP-k to Evaluate Bioinformatics Retrieval Methods
- PCI 1.0 – Calculate Barcode Gap Probability of Correct Identification of Species.
- DSSP 2.1.0 – Calculates DSSP Entries from PDB Entries
- TM-score 20121217 – Calculate Similarity of Topologies of two Protein Structures
- SPRSupertrees 1.1.1 – Calculate Rooted Supertrees that Minimize the SPR Distance.
- rSPR 1.1.1 – Calculate Rooted Subtree-prune-and-regraft Distances and rooted agreement forest
- PhylTools 1.32 – Calculate Genetic Distances
- markerSearchPower 1.0 – Calculate Statistical Power of Strategies Detecting Associated Markers
- KinInfor v1 – Calculate Informativeness of Markers in Inferring Pairwise Relatedness
- gKaKs 1.2.2 – Genome level calculate Ka/Ks
- REGENT 1.0.5 – Calculate Risks Conferred by Genetic Factors and Multi-level Environmental Factors
- ClusterDis – Calculate Distances of STRUCTURE Clusters
- kcoeff – Calculate Genetic Relatedness from SNP data
- K-Estimator 6.1v – Calculate the number of Nucleotide Substitutions
- ENCprime 20060602 – Calculate Codon Usage Bias summary statistic, Nc’
- MetAl 1.1 – Calculate Metric Distances between Alternative Alignments of the same Sequences
- Convergence – Calculate Divergence and Convergence using Modifications of the Codeml program
- Breakpoint Calculator 0.2 – Calculate Breakpoint Counts for each pair and triplet of Genomes
- GAAS 0.16 – Calculate Accurate Community Composition and Average Genome Size
- jlogP 2.3 – Calculates Hydrophobicity & Molecular Formula of Molecules
- CLENCH 2.0 – Calculate Cluster Enrichment using the Gene Ontology
- MAXPROC – Calculate Maximum Likelihood Estimates of Linkage Parameters
- silcLOD – Calculate Nominal Significance Levels and Critical LOD Scores
- PROBMAX 3n – Calculate Maximum Probability of Progeny Assignments
- RTP – Calculate Significance of Truncated Products of P-values
- GelyMac – Calculate DNA Fragment sizes from Gel Electrophoresis Migration data
- MiniInbred 2.0 – Calculate and Minimize Inbreeding Coefficients
- SURFace – Calculate Solvent accessible surface area
- ASJPSoftware 2.1 – Calculate ASJP Distance Matrices
- HOTEL_FAM 0.3 – Calculate Hotelling’s T2 Statistic for data of nuclear families
- HOTEL_CC 0.1 – Calculate Hotelling’s T2 Statistic for Case-control data
- Kaks_Calculator 1.2 – Calculate Ka and Ks through Model Selection and Model Averaging
- DNAMIX 3.2 – Calculate Likelihood Ratios for Mixed DNA Samples Encountered in Forensic Science
- Annot 1.0 / PLINK2wakefieldBF 1.0 – Calculate Bayes Factors
- GeneticDistances 20090824 – Calculate common Genetic Distances for Allele Frequency data
- SplitDist 1.1.7 – Calculate Number of Splits (edges) that Differs for two Trees
- EI_EXCHANGE 1.0 – Calculate Elementary Mode
- CalSpec 1.3 – Calculate Spectra
- AVP 1.3 – Calculate Protein Void Volumes and Packing Quality
- Torsions – Calculates Backbone Torsion Angles from a PDB file
- CGHdist 1.0 – Calculates Mximum Likelihood-based Distances from Gene Content
- VisSPA 1.62 – Calculate Frequency of Residues
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