Bioinformatics
- CLC Main Workbench 6.8.3 – Bioinformatics Workbench
- Bio-ULanix Beta2R3 – Linux Workbench for Bioinformatics
- Geneious 6.1.5 – Bioinformatics Software Suite
- UGENE 1.11.5 – Integrated Bioinformatics Tools
- MolQuest 2.4.3 – Bioinformatics Toolbox for Analysis of Biomedical Data
- CLC Sequence Viewer 6.8.2 – Sequence Viewer for Basic Bioinformatics
- Bio++ 2.1.0 – C++ Libraries for Bioinformatics
- Pygr 0.82 – Python Graph Database Framework for Bioinformatics
- Gaggle – Bioinformatics Data-integration platform
- Bioconductor 2.12 – Open Source Software for Bioinformatics
- birgHPC 1.2.1 – Creating instant Computing Clusters for Bioinformatics
- Orange-Bioinformatics 2.5a – Orange Bioinformatics add-on for Orange data mining software package
- PAICE 2.92 – Bioinformatics Pathway Visualization
- CDK 1.4.17 – Java Library for Structural Chemo- & Bioinformatics
- jORCA 201207 – Easily integrating bioinformatics web services
- Biowep – Workflow Enactment Portal for Bioinformatics
- BioCRF 0.9 – Grammatical-Restrained HCRF tool for Bioinformatics applications
- Ergatis v2r18 – A Workflow System for Bioinformatics
- Bioinformatics Analysis Scripts
- JPerl 200704 – Jamie’s Perl Scripts for Bioinformatics
- BioC++ 0.3 – C++ Computational Libraries for Bioinformatics
- BTL 3.4 – The Bioinformatics Template Library
- BioDB-Loader – Lisp tools for bioinformatics
- BioWarehouse 4.6 – Database Integration for Bioinformatics
- WebLab 1.2 – Multifunctional Bioinformatics Analysis Platform
- NCBI C++ Toolkit 9.0 – Collection of C++ Modules for Bioinformatics
- MoSDi 1.3 – Sequence Analysis Toolkit for Bioinformatics
- BRM 2.3 – Bioinformatics Resource Manager
- EMBOSS 6.5.7 / Jemboss – Suite of Bioinformatics Tools
- ABCGrid 0.1 – Application of Bioinformatics Computing Grid
- Biopackages 1.9 – Packages for Bioinformatics
- DART 0.2 – Library includes a number of Bioinformatics Alignment Programs
- Darwin 2.1 – Programming Environment for Bioinformatics
- BioSLAX 7.5 – BioInformatics LiveCD Suite
- VLinux 2.0 alpha 2 – Linux Workbench for Bioinformatics
- BioPuppy 2.0 beta – Workbench for Bioinformatics and Computational Biology
- KNOB 4.1 – CD-bootable Linux for bioinformatics
- VigyaanCD 1.0 – Workbench for Bioinformatics
- DNASIS MAX 3.0 – Bioinformatics Software for DNA/RNA/Amino Acid Sequence Analysis
- BioCocoa 2.2.2 – Cocoa Framework for Bioinformatics
- BioWeka 0.6.1 – Weka Framework for Bioinformatics
- DNALinux VD – A Linux Solution for Bioinformatics
- BioGridRunner 2002 – Bioinformatics Data Grid Application
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